ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1upsB1 - ECOD Domain | ECOD

ECOD/Domains/e1upsB1

e1upsB1

UID: 000029883

PDB

Range: B:19-284
PDB: 1UPS chain B(all domains)
UniProt: Q934G8 (all domains)
Gene: gngC

Molecule: GLCNAC-ALPHA-1,4-GAL-RELEASING ENDO-BETA-GALACTOSIDASE

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_16 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilyGlyco_hydro_16(10.1.1.11)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00722Glyco_hydro_16

Glycosyl hydrolases family 16

ClanCL0004Concanavalin

External Links

ECOD PDB View: 1UPS RCSB PDB: 1UPS PDBe: 1UPS UniProt: Q934G8

Downloads

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