ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8edkA4 - ECOD Domain | ECOD

ECOD/Domains/e8edkA4

e8edkA4

UID: 002989481

PDB

Range: A:291-345
PDB: 8EDK chain A(all domains)

Molecule: Netrin unc-6

3D Structure

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Related Domains

Browse other domains in EGF_LMN_ATRN →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupEGF-like(389)

HH-groupEGF-related(389.1)

TT-groupEGF/Laminin(389.1.1)

FFamilyEGF_LMN_ATRN(389.1.1.53)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF24973EGF_LMN_ATRN

Laminin/attractin EGF domain

ClanCL0001EGF

External Links

ECOD PDB View: 8EDK RCSB PDB: 8EDK PDBe: 8EDK

Downloads

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