ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8eyfA3 - ECOD Domain | ECOD

ECOD/Domains/e8eyfA3

e8eyfA3

UID: 002991535

PDB

Range: A:746-1084
PDB: 8EYF chain A(all domains)

Molecule: M1 family aminopeptidase

3D Structure

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Related Domains

Browse other domains in DUF3458_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyDUF3458_C(109.4.1.241)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Dimethyl sulfoxide, Glycerin)

Dimethyl sulfoxideDMS
DrugBank DB01093
GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF17432DUF3458_C

Domain of unknown function (DUF3458_C) ARM repeats

ClanCL0020TPR

External Links

ECOD PDB View: 8EYF RCSB PDB: 8EYF PDBe: 8EYF

Downloads

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