ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8f8yA3 - ECOD Domain | ECOD

ECOD/Domains/e8f8yA3

e8f8yA3

UID: 002992200

PDB

Range: A:0-65
PDB: 8F8Y chain A(all domains)

Molecule: Lysine-specific demethylase PHF2

3D Structure

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Related Domains

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Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupFYVE/PHD zinc finger(376.1.3)

FFamilyPHD(376.1.3.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PHD-finger

ClanCL0229RING

External Links

ECOD PDB View: 8F8Y RCSB PDB: 8F8Y PDBe: 8F8Y

Downloads

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