ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7fakA3 - ECOD Domain | ECOD

ECOD/Domains/e7fakA3

e7fakA3

UID: 002992231

PDB

Range: A:720-830
PDB: 7FAK chain A(all domains)

Molecule: Prolyl-tRNA synthetase (ProRS)

3D Structure

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Related Domains

Browse other domains in ProRS-C_1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupIF3-like(328)

HH-groupC-terminal domain of ProRS(328.2)

TT-groupC-terminal domain of ProRS(328.2.1)

FFamilyProRS-C_1(328.2.1.1)

Ligands

in contact, ≤ 4 Å

4-[(3S)-3-cyano-3-cyclopropyl-2-oxidanylidene-pyrrolidin-1-yl]-N-[[3-fluoranyl-5-(5-methoxypyridin-3-yl)phenyl]methyl]-6-methyl-pyridine-2-carboxamide1UI
within 5 Å only

+ 2 additives (Acetate, Formic acid)

AcetateACT
DrugBank DB14511

Pfam Families

PF09180ProRS-C_1

Prolyl-tRNA synthetase, C-terminal

External Links

ECOD PDB View: 7FAK RCSB PDB: 7FAK PDBe: 7FAK

Downloads

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Formic acidFMT

Shown in the structure viewer. Drug annotations from DrugDomain.