ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8gvmU1 - ECOD Domain | ECOD

ECOD/Domains/e8gvmU1

e8gvmU1

UID: 002994310

PDB

Range: U:7-85
PDB: 8GVM chain U(all domains)

Molecule: Cytochrome c oxidase subunit 6B1

3D Structure

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Related Domains

Browse other domains in COX6B →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupCytochrome c oxidase subunit h(540)

HH-groupCytochrome c oxidase subunit h(540.1)

TT-groupCytochrome c oxidase subunit h(540.1.1)

FFamilyCOX6B(540.1.1.1)

Ligands

in contact, ≤ 4 Å

(1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATEPGV

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Cytochrome oxidase c subunit VIb

ClanCL0351CHCH

External Links

ECOD PDB View: 8GVM RCSB PDB: 8GVM PDBe: 8GVM

Downloads

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