ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8h0sD1 - ECOD Domain | ECOD

ECOD/Domains/e8h0sD1

e8h0sD1

UID: 002994805

PDB

Range: D:2-191
PDB: 8H0S chain D(all domains)

Molecule: Putative rRNA methylase YtqB

3D Structure

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Related Domains

Browse other domains in rRNA_methylase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyrRNA_methylase(2003.1.5.59)

Ligands

in contact, ≤ 4 Å

AdemetionineSAM
drugDrugBank DB00118

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF06962rRNA_methylase

Putative rRNA methylase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 8H0S RCSB PDB: 8H0S PDBe: 8H0S

Downloads

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