ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8hdfA3 - ECOD Domain | ECOD

ECOD/Domains/e8hdfA3

e8hdfA3

UID: 002995613

PDB

Range: A:377-460
PDB: 8HDF chain A(all domains)

Molecule: Long-chain-fatty-acid--AMP ligase FadD23

3D Structure

Loading viewer...

Related Domains

Browse other domains in AMP-binding →

Classification

AArchitecturebeta barrels(a.1)

XX-groupbeta-barrel domain in acetyl-CoA synthetase-like proteins(4011)

HH-groupbeta-barrel domain in acetyl-CoA synthetase-like proteins(4011.1)

TT-groupbeta-barrel domain in acetyl-CoA synthetase-like proteins(4011.1.1)

FFamilyAMP-binding(4011.1.1.1)

Ligands

in contact, ≤ 4 Å

Phosphoaminophosphonic acid-adenylate esterANP

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00501AMP-binding

AMP-binding enzyme

ClanCL0378ANL

External Links

ECOD PDB View: 8HDF RCSB PDB: 8HDF PDBe: 8HDF

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure