ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8hdfA4 - ECOD Domain | ECOD

ECOD/Domains/e8hdfA4

e8hdfA4

UID: 002995614

PDB

Range: A:461-575
PDB: 8HDF chain A(all domains)

Molecule: Long-chain-fatty-acid--AMP ligase FadD23

3D Structure

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Related Domains

Browse other domains in AMP-dom_DIP2-like →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupa+b domain in acetyl-CoA synthetase-like proteins(327.5)

TT-groupa+b domain in acetyl-CoA synthetase-like proteins(327.5.1)

FFamilyAMP-dom_DIP2-like(327.5.1.6)

Ligands

in contact, ≤ 4 Å

Phosphoaminophosphonic acid-adenylate esterANP
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF23024AMP-dom_DIP2-like

Disco-interacting protein 2-like, AMP domain

ClanCL0531AMP-binding_C

External Links

ECOD PDB View: 8HDF RCSB PDB: 8HDF PDBe: 8HDF

Downloads

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