ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1zmlA1 - ECOD Domain | ECOD

ECOD/Domains/e1zmlA1

e1zmlA1

UID: 000299645

PDB

Range: A:16-244
PDB: 1ZML chain A(all domains)
UniProt: P03951 (all domains)
Gene: F11

Molecule: Coagulation factor XI

3D Structure

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Related Domains

Browse other domains in Trypsin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel 2(1.1.17)

FFamilyTrypsin(1.1.17.1)

Ligands

in contact, ≤ 4 Å

(R)-1-(4-(4-(Hydroxymethyl)-1,3,2-dioxaborolan-2-YL)phenethyl)guanidine412
drugDrugBank DB07071

+ 2 additives (Sulfate ion, Bicarbonate ion)

Sulfate ionSO4

Pfam Families

PF00089Trypsin

Trypsin

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 1ZML RCSB PDB: 1ZML PDBe: 1ZML UniProt: P03951

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Bicarbonate ionBCT

Shown in the structure viewer. Drug annotations from DrugDomain.