ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7uioAB2 - ECOD Domain | ECOD

ECOD/Domains/e7uioAB2

e7uioAB2

UID: 003004369

PDB

Range: AB:1098-1224
PDB: 7UIO chain AB(all domains)

Molecule: DNA-directed RNA polymerase II subunit RPB2

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupC-terminal domain in beta subunit of DNA dependent RNA-polymerase(4043)

HH-groupC-terminal domain in beta subunit of DNA dependent RNA-polymerase(4043.1)

TT-groupC-terminal domain in beta subunit of DNA dependent RNA-polymerase(4043.1.1)

FFamilyRNA_pol_Rpb2_6,RNA_pol_Rpb2_7(4043.1.1.1)

Ligands

in contact, ≤ 4 Å

AlanineALA
drugDrugBank DB00160within 5 Å only
Aspartic acidASP
drugDrugBank DB00128within 5 Å only

Pfam Families

PF00562RNA_pol_Rpb2_6

RNA polymerase Rpb2, domain 6

ClanCL0410LEF-8-like

PF04560RNA_pol_Rpb2_7

RNA polymerase Rpb2, domain 7

External Links

ECOD PDB View: 7UIO RCSB PDB: 7UIO PDBe: 7UIO

Downloads

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ThreonineTHR

drugDrugBank DB00156within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.