ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7vchF1 - ECOD Domain | ECOD

ECOD/Domains/e7vchF1

e7vchF1

UID: 003005634

PDB

Range: F:4-155
PDB: 7VCH chain F(all domains)

Molecule: Elongation factor P maturation arginine rhamnosyltransferase EarP

3D Structure

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Related Domains

Browse other domains in EarP →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512)

HH-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1)

TT-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1.1)

FFamilyEarP(7512.1.1.26)

Ligands

in contact, ≤ 4 Å

2'-Deoxy-thymidine-beta-L-rhamnoseTRH
drugDrugBank DB03723

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

Elongation-Factor P (EF-P) rhamnosyltransferase EarP

ClanCL0113GT-B

External Links

ECOD PDB View: 7VCH RCSB PDB: 7VCH PDBe: 7VCH

Downloads

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Drug annotations from DrugDomain.