ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7vmkF1 - ECOD Domain | ECOD

ECOD/Domains/e7vmkF1

e7vmkF1

UID: 003005781

PDB

Range: F:1-102,F:125-384
PDB: 7VMK chain F(all domains)

Molecule: Tubulin tyrosine ligase

3D Structure

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Related Domains

Browse other domains in TTL, ATPgrasp_YheCD →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupATP-grasp(206.1.3)

FFamilyTTL, ATPgrasp_YheCD(206.1.3.55)

Ligands

in contact, ≤ 4 Å

Adenosine-5'-[Beta, Gamma-Methylene]TriphosphateACP
drugDrugBank DB03909

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Tubulin-tyrosine ligase family

ClanCL0179ATP-grasp

PF14398ATPgrasp_YheCD

YheC/D like ATP-grasp

ClanCL0179ATP-grasp

External Links

ECOD PDB View: 7VMK RCSB PDB: 7VMK PDBe: 7VMK

Downloads

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