ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7ymrB1 - ECOD Domain | ECOD

ECOD/Domains/e7ymrB1

e7ymrB1

UID: 003015509

PDB

Range: B:33-333
PDB: 7YMR chain B(all domains)

Molecule: Lysoplasmalogenase

3D Structure

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Related Domains

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Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGDPD(2002.1.1.106)

Ligands

in contact, ≤ 4 Å

[(2~{R})-2-oxidanyl-3-[oxidanyl-[2-(trimethyl-$l^{5}-azanyl)ethoxy]phosphoryl]oxy-propyl] hexadecanoateKIP

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Glycerophosphoryl diester phosphodiesterase family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 7YMR RCSB PDB: 7YMR PDBe: 7YMR

Downloads

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