ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7yq1B1 - ECOD Domain | ECOD

ECOD/Domains/e7yq1B1

e7yq1B1

UID: 003015654

PDB

Range: B:0-172
PDB: 7YQ1 chain B(all domains)

Molecule: Adenylyl-sulfate kinase

3D Structure

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Related Domains

Browse other domains in APS_kinase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyAPS_kinase(2004.1.1.64)

Ligands

in contact, ≤ 4 Å

Adenosine 5'-phosphosulfateADX
drugDrugBank DB03708
Boric acidBO3
drugDrugBank DB11326
Phosphoaminophosphonic acid-adenylate ester

Pfam Families

PF01583APS_kinase

Adenylylsulphate kinase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 7YQ1 RCSB PDB: 7YQ1 PDBe: 7YQ1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Magnesium ionMG

metal

+ 1 additive (Glycerol)

GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.