ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7yseB1 - ECOD Domain | ECOD

ECOD/Domains/e7yseB1

e7yseB1

UID: 003015930

PDB

Range: B:2-300
PDB: 7YSE chain B(all domains)

Molecule: Glycine--tRNA ligase alpha subunit

3D Structure

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Related Domains

Browse other domains in tRNA-synt_2e →

Classification

AArchitecturea+b three layers(a.12)

XX-groupClass II aaRS and biotin synthetases(314)

HH-groupClass II aaRS and biotin synthetases(314.1)

TT-groupClass II aaRS and biotin synthetases(314.1.1)

FFamilytRNA-synt_2e(314.1.1.5)

Ligands

in contact, ≤ 4 Å

[(2R,3S,4R,5R)-5-(6-azanyl-2-chloranyl-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl N-(2-azanylethanoyl)sulfamateJPO
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02091tRNA-synt_2e

Glycyl-tRNA synthetase alpha subunit

ClanCL0040tRNA_synt_II

External Links

ECOD PDB View: 7YSE RCSB PDB: 7YSE PDBe: 7YSE

Downloads

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