ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7ywcB1 - ECOD Domain | ECOD

ECOD/Domains/e7ywcB1

e7ywcB1

UID: 003016093

PDB

Range: B:2-81,B:182-285
PDB: 7YWC chain B(all domains)

Molecule: Chorismate dehydratase

3D Structure

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Related Domains

Browse other domains in VitK2_biosynth →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyVitK2_biosynth(7523.1.1.11)

Ligands

in contact, ≤ 4 Å

(3R,4R)-3-[(1-carboxyethenyl)oxy]-4-hydroxycyclohexa-1,5-diene-1-carboxylic acidISJ

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02621VitK2_biosynth

Menaquinone biosynthesis

ClanCL0177PBP

External Links

ECOD PDB View: 7YWC RCSB PDB: 7YWC PDBe: 7YWC

Downloads

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