ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7z5uA1 - ECOD Domain | ECOD

ECOD/Domains/e7z5uA1

e7z5uA1

UID: 003016752

PDB

Range: A:398-675
PDB: 7Z5U chain A(all domains)

Molecule: Collagenase ColG

3D Structure

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Related Domains

Browse other domains in Peptidase_M9 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M9(2498.1.1.16)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
(2~{R})-~{N}-[2-[4-[(2-acetamidophenoxy)methyl]-1,2,3-triazol-1-yl]ethyl]-2-(2-methylpropyl)-~{N}'-oxidanyl-propanediamideIFW
Zinc ionZN

Pfam Families

PF01752Peptidase_M9

Collagenase

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 7Z5U RCSB PDB: 7Z5U PDBe: 7Z5U

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

Shown in the structure viewer. Drug annotations from DrugDomain.