ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7zyvI1 - ECOD Domain | ECOD

ECOD/Domains/e7zyvI1

e7zyvI1

UID: 003018863

PDB

Range: I:2-215
PDB: 7ZYV chain I(all domains)

Molecule: Cytochrome b6

3D Structure

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Related Domains

Browse other domains in Cytochrome_B →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTransmembrane heme-binding four-helical bundle(5069)

HH-groupTransmembrane heme-binding four-helical bundle(5069.1)

TT-groupTransmembrane di-heme cytochromes(5069.1.1)

FFamilyCytochrome_B(5069.1.1.1)

Ligands

in contact, ≤ 4 Å

Chlorophyll ACLA
drugDrugBank DB02133
Ferroheme CHEC
drugDrugBank DB03317
Ferroheme

Pfam Families

PF00033Cytochrome_B

Cytochrome b/b6/petB

ClanCL03282heme_cytochrom

External Links

ECOD PDB View: 7ZYV RCSB PDB: 7ZYV PDBe: 7ZYV

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

drugDrugBank DB18267

Undecyl-Beta-D-MaltopyranosideUMQ

drugDrugBank DB02686

Beta caroteneBCR

drugDrugBank DB06755within 5 Å only

2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONEPL9

Shown in the structure viewer. Drug annotations from DrugDomain.