ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2dgeB1 - ECOD Domain | ECOD

ECOD/Domains/e2dgeB1

e2dgeB1

UID: 000302188

PDB

Range: B:71-172
PDB: 2DGE chain B(all domains)
UniProt: Q93VA3 (all domains)
Gene: PETJ

Molecule: Cytochrome c6

3D Structure

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Related Domains

Browse other domains in Cytochrome_CBB3 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupCytochrome c-like(107)

HH-groupCytochrome c(107.1)

TT-groupCytochrome c(107.1.1)

FFamilyCytochrome_CBB3(107.1.1.9)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267within 5 Å only
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13442Cytochrome_CBB3

Cytochrome C oxidase, cbb3-type, subunit III

ClanCL0318Cytochrome-c

External Links

ECOD PDB View: 2DGE RCSB PDB: 2DGE PDBe: 2DGE UniProt: Q93VA3

Downloads

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