ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8eipC1 - ECOD Domain | ECOD

ECOD/Domains/e8eipC1

e8eipC1

UID: 003022261

PDB

Range: C:10-298
PDB: 8EIP chain C(all domains)

Molecule: Succinylglutamate desuccinylase

3D Structure

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Related Domains

Browse other domains in AstE_AspA_cat →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPhosphorylase/hydrolase-like(2011)

HH-groupZn-dependent exopeptidases(2011.1)

TT-groupZn-dependent exopeptidases(2011.1.1)

FFamilyAstE_AspA_cat(2011.1.1.18)

Ligands

in contact, ≤ 4 Å

(2~{S})-4-[[(2~{S})-5-[[azanyl($l^{4}-azanylidene)methyl]amino]-1-$l^{1}-oxidanyl-1-oxidanylidene-pentan-2-yl]amino]-2-$l^{2}-azanyl-4-oxidanylidene-butanoic acid7ID
Zinc ionZN
metal
MANGANESE (II) ION

Pfam Families

PF24827AstE_AspA_cat

Succinylglutamate desuccinylase/Aspartoacylase catalytic domain

ClanCL0865ZnExoPePases

External Links

ECOD PDB View: 8EIP RCSB PDB: 8EIP PDBe: 8EIP

Downloads

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metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.