ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8b01B1 - ECOD Domain | ECOD

ECOD/Domains/e8b01B1

e8b01B1

UID: 003023560

PDB

Range: B:1-427
PDB: 8B01 chain B(all domains)

Molecule: Putative TRAP-type C4-dicarboxylate transport system, large permease component

3D Structure

Loading viewer...

Related Domains

Browse other domains in DctM →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupdicarboxylate/sodium symporter(3355)

HH-groupdicarboxylate/sodium symporter(3355.1)

TT-groupdicarboxylate/sodium symporter(3355.1.1)

FFamilyDctM(3355.1.1.4)

Ligands

in contact, ≤ 4 Å

DecaneD10
HexaneHEX
Sodium ionNA
metal
N-octaneOCT

Pfam Families

Tripartite ATP-independent periplasmic transporter, DctM component

ClanCL0182IT

External Links

ECOD PDB View: 8B01 RCSB PDB: 8B01 PDBe: 8B01

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

PhosphatidylethanolaminePTY

TridecaneTRD

DocosaneTWT

Shown in the structure viewer. Drug annotations from DrugDomain.