ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8bj8A2 - ECOD Domain | ECOD

ECOD/Domains/e8bj8A2

e8bj8A2

UID: 003023793

PDB

Range: A:87-395
PDB: 8BJ8 chain A(all domains)

Molecule: Periplasmic [Fe] hydrogenase large subunit

3D Structure

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Related Domains

Browse other domains in Fe_hyd_lg_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFe-only hydrogenase(7556)

HH-groupFe-only hydrogenase(7556.1)

TT-groupFe-only hydrogenase(7556.1.1)

FFamilyFe_hyd_lg_C(7556.1.1.1)

Ligands

in contact, ≤ 4 Å

Iron/sulfur clusterSF4
Binuclear [FeFe], di(thiomethyl)amine, carbon monoxide, cyanide cluster (-CN form)VHR

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02906Fe_hyd_lg_C

Iron only hydrogenase large subunit, C-terminal domain

External Links

ECOD PDB View: 8BJ8 RCSB PDB: 8BJ8 PDBe: 8BJ8

Downloads

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