ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8cnsA3 - ECOD Domain | ECOD

ECOD/Domains/e8cnsA3

e8cnsA3

UID: 003026498

PDB

Range: A:130-220
PDB: 8CNS chain A(all domains)

Molecule: Hybrid cluster protein from Methanothermococcus thermolithotrophicus

3D Structure

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Related Domains

Browse other domains in Prismane →

Classification

AArchitecturealpha bundles(a.7)

XX-groupHelical bundle domain in prismane-like proteins(4044)

HH-groupHelical bundle domain in prismane-like proteins(4044.1)

TT-groupHelical bundle domain in prismane-like proteins(4044.1.1)

FFamilyPrismane(4044.1.1.1)

Ligands

in contact, ≤ 4 Å

TriglymePG5
drugDrugBank DB02078
HydroxyamineHOA
(4R)-2-METHYLPENTANE-2,4-DIOLMRD

Pfam Families

PF03063Prismane

Prismane/CO dehydrogenase family

ClanCL0113GT-B

External Links

ECOD PDB View: 8CNS RCSB PDB: 8CNS PDBe: 8CNS

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 4 additives (Acetate, Tromethamine, 1,2-ETHANEDIOL, …)

AcetateACT
DrugBank DB14511
TromethamineTRS
DrugBank DB03754
1,2-ETHANEDIOLEDO
Formic acidFMT

Shown in the structure viewer. Drug annotations from DrugDomain.