ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8d2uA1 - ECOD Domain | ECOD

ECOD/Domains/e8d2uA1

e8d2uA1

UID: 003027096

PDB

Range: A:33-270
PDB: 8D2U chain A(all domains)

Molecule: Sodium-dependent lysophosphatidylcholine symporter 1-B

3D Structure

Loading viewer...

Related Domains

Browse other domains in MFS_2 →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupMajor facilitator superfamily (MFS) general substrate transporter(5050)

HH-groupMajor facilitator superfamily (MFS) general substrate transporter(5050.1)

TT-groupMajor facilitator superfamily (MFS) general substrate transporter(5050.1.1)

FFamilyMFS_2(5050.1.1.10)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal
[(2~{R})-2-oxidanyl-3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxy-propyl] (9~{Z},12~{Z},15~{Z})-octadeca-9,12,15-trienoateZGS

+ 1 additive (Dodecyl-beta-d-maltoside)

Dodecyl-beta-d-maltosideLMT

Pfam Families

MFS/sugar transport protein

ClanCL0015MFS

External Links

ECOD PDB View: 8D2U RCSB PDB: 8D2U PDBe: 8D2U

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Shown in the structure viewer. Drug annotations from DrugDomain.