ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8do2A1 - ECOD Domain | ECOD

ECOD/Domains/e8do2A1

e8do2A1

UID: 003027626

PDB

Range: A:6-468
PDB: 8DO2 chain A(all domains)

Molecule: Protein transport protein Sec61 subunit alpha isoform 1

3D Structure

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Related Domains

Browse other domains in SecY,Plug_translocon →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupPreprotein translocase SecY subunit(5061)

HH-groupPreprotein translocase SecY subunit(5061.1)

TT-groupPreprotein translocase SecY subunit(5061.1.1)

FFamilySecY,Plug_translocon(5061.1.1.2)

Ligands

in contact, ≤ 4 Å

9-benzyl-1,5-bis(4-methylbenzene-1-sulfonyl)-3-methylidene-1,5,9-triazacyclododecaneSXU

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

SecY

ClanCL0376Oxa1

PF10559Plug_translocon

Plug domain of Sec61p

External Links

ECOD PDB View: 8DO2 RCSB PDB: 8DO2 PDBe: 8DO2

Downloads

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