ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8dtoA3 - ECOD Domain | ECOD

ECOD/Domains/e8dtoA3

e8dtoA3

UID: 003027681

PDB

Range: A:120-202
PDB: 8DTO chain A(all domains)

Molecule: CH848.3.D0949.10.17chim.6R.DS.SOSIP.664_N133D_N138T gp120

3D Structure

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Related Domains

Browse other domains in GP120 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupV1/V2 domain in HIV gp120(6173)

HH-groupV1/V2 domain in HIV gp120(6173.1)

TT-groupV1/V2 domain in HIV gp120(6173.1.1)

FFamilyGP120(6173.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Envelope glycoprotein GP120

External Links

ECOD PDB View: 8DTO RCSB PDB: 8DTO PDBe: 8DTO

Downloads

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