ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8efvD3 - ECOD Domain | ECOD

ECOD/Domains/e8efvD3

e8efvD3

UID: 003028209

PDB

Range: D:167-241
PDB: 8EFV chain D(all domains)

Molecule: Holliday junction ATP-dependent DNA helicase RuvB

3D Structure

Loading viewer...

Related Domains

Browse other domains in AAA_lid_4 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHistone-like(148)

HH-groupHistone-related(148.1)

TT-groupAAA+ ATPase lid domain(148.1.3)

FFamilyAAA_lid_4(148.1.3.21)

Ligands

in contact, ≤ 4 Å

Adenosine 5'-[gamma-thio]triphosphateAGS
drugDrugBank DB02930

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF17864AAA_lid_4

RuvB AAA lid domain

ClanCL0671AAA_lid

External Links

ECOD PDB View: 8EFV RCSB PDB: 8EFV PDBe: 8EFV

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure