ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8f4jR1 - ECOD Domain | ECOD

ECOD/Domains/e8f4jR1

e8f4jR1

UID: 003029350

PDB

Range: R:2-35
PDB: 8F4J chain R(all domains)

Molecule: Photosystem II protein Y

3D Structure

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Related Domains

Browse other domains in PsbY →

Classification

AArchitectureextended segments(a.20)

XX-groupPhotosystem II protein Y, psbY(6106)

HH-groupPhotosystem II protein Y, psbY(6106.1)

TT-groupPhotosystem II protein Y, psbY(6106.1.1)

FFamilyPsbY(6106.1.1.1)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267
Stearic acidSTE
drugDrugBank DB03193
1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL

Pfam Families

Photosystem II protein Y (PsbY)

External Links

ECOD PDB View: 8F4J RCSB PDB: 8F4J PDBe: 8F4J

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.