ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8f6pA2 - ECOD Domain | ECOD

ECOD/Domains/e8f6pA2

e8f6pA2

UID: 003029462

PDB

Range: A:1482-1780
PDB: 8F6P chain A(all domains)

Molecule: Sodium channel protein type 5 subunit alpha,Green fluorescent protein

3D Structure

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Related Domains

Browse other domains in Ion_trans →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyIon_trans(5054.1.1.2)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
[(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate6OU
beta-D-mannopyranose

Pfam Families

PF00520Ion_trans

Ion transport protein

ClanCL0030Ion_channel

External Links

ECOD PDB View: 8F6P RCSB PDB: 8F6P PDBe: 8F6P

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(R)-ranolazineXHO

Cholesterol hemisuccinateY01

Shown in the structure viewer. Drug annotations from DrugDomain.