ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1mpgA1 - ECOD Domain | ECOD

ECOD/Domains/e1mpgA1

e1mpgA1

UID: 000003030

RepresentativePDB

Range: A:100-282
PDB: 1MPG chain A(all domains)
UniProt: P04395 (all domains)
Gene: alkA

Molecule: 3-METHYLADENINE DNA GLYCOSYLASE II

3D Structure

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Related Domains

Browse other domains in HhH-GPD →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupDNA-glycosylase(102.1.2)

FFamilyHhH-GPD(102.1.2.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00730HhH-GPD

HhH-GPD superfamily base excision DNA repair protein

ClanCL0198HHH

External Links

ECOD PDB View: 1MPG RCSB PDB: 1MPG PDBe: 1MPG UniProt: P04395

Downloads

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