ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8gs8D1 - ECOD Domain | ECOD

ECOD/Domains/e8gs8D1

e8gs8D1

UID: 003032650

PDB

Range: D:59-159
PDB: 8GS8 chain D(all domains)

Molecule: Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial

3D Structure

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Related Domains

Browse other domains in CybS →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTransmembrane heme-binding four-helical bundle(5069)

HH-groupTransmembrane heme-binding four-helical bundle(5069.1)

TT-groupFumarate reductase respiratory complex transmembrane subunits(5069.1.3)

FFamilyCybS(5069.1.3.4)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267
Ubiquinone Q1UQ1
drugDrugBank DB08689
(1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE

Pfam Families

CybS, succinate dehydrogenase cytochrome B small subunit

ClanCL0335FumRed-TM

External Links

ECOD PDB View: 8GS8 RCSB PDB: 8GS8 PDBe: 8GS8

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.