ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8gvxA2 - ECOD Domain | ECOD

ECOD/Domains/e8gvxA2

e8gvxA2

UID: 003032748

PDB

Range: A:359-665
PDB: 8GVX chain A(all domains)

Molecule: Short transient receptor potential channel 5

3D Structure

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Related Domains

Browse other domains in Ion_trans →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyIon_trans(5054.1.1.2)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
PhosphatidylethanolaminePTY
Cholesterol hemisuccinateY01

Pfam Families

PF00520Ion_trans

Ion transport protein

ClanCL0030Ion_channel

External Links

ECOD PDB View: 8GVX RCSB PDB: 8GVX PDBe: 8GVX

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(2S)-2-(hexadecanoyloxy)-3-hydroxypropyl (9Z)-octadec-9-enoateYZY

Shown in the structure viewer. Drug annotations from DrugDomain.