ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8i5sA1 - ECOD Domain | ECOD

ECOD/Domains/e8i5sA1

e8i5sA1

UID: 003033748

PDB

Range: A:451-485,A:505-801
PDB: 8I5S chain A(all domains)

Molecule: beta-glucosidase

3D Structure

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Related Domains

Browse other domains in DUF608 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilyDUF608(109.2.1.14)

Ligands

in contact, ≤ 4 Å

2-deoxy-2-fluoro-α-D-glucoseG2F
drugDrugBank DB04282
Calcium ionCA
metal
2,4-dinitrophenyl 2-deoxy-2-fluoro-beta-D-glucopyranoside

Pfam Families

PF04685GH116_catalytic

Glycosyl-hydrolase family 116, catalytic region

ClanCL00596_Hairpin

External Links

ECOD PDB View: 8I5S RCSB PDB: 8I5S PDBe: 8I5S

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.