ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2exkD1 - ECOD Domain | ECOD

ECOD/Domains/e2exkD1

e2exkD1

UID: 000030347

PDB

Range: D:325-534
PDB: 2EXK chain D(all domains)
UniProt: Q09LX0 (all domains)
Gene: xynB3

Molecule: beta-D-xylosidase

3D Structure

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Related Domains

Browse other domains in GH43_C2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilyGH43_C2(10.1.1.41)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 1 additive (2-(N-morpholino)ethanesulfonic acid)

2-(N-morpholino)ethanesulfonic acidMES
DrugBank DB03814

Shown in the structure viewer.

Pfam Families

PF17851GH43_C2

Beta xylosidase C-terminal Concanavalin A-like domain

ClanCL0004Concanavalin

External Links

ECOD PDB View: 2EXK RCSB PDB: 2EXK PDBe: 2EXK UniProt: Q09LX0

Downloads

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Drug annotations from DrugDomain.