ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1nqdA1 - ECOD Domain | ECOD

ECOD/Domains/e1nqdA1

e1nqdA1

UID: 000030351

PDB

Range: A:908-1008
PDB: 1NQD chain A(all domains)
UniProt: Q9S0X0 (all domains)

Molecule: class 1 collagenase

3D Structure

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Related Domains

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Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupGalactose-binding domain-like(10.32)

TT-groupGalactose-binding domain-like(10.32.1)

FFamilyPPC(10.32.1.19)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Bacterial pre-peptidase C-terminal domain

ClanCL0202GBD

External Links

ECOD PDB View: 1NQD RCSB PDB: 1NQD PDBe: 1NQD UniProt: Q9S0X0

Downloads

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