ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e2o8oB1 - ECOD Domain | ECOD

ECOD/Domains/e2o8oB1

e2o8oB1

UID: 000030353

PDB

Range: B:1908-2008
PDB: 2O8O chain B(all domains)
UniProt: Q9S0X0 (all domains)

Molecule: Collagenase

3D Structure

Loading viewer...

Related Domains

Browse other domains in PPC →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupGalactose-binding domain-like(10.32)

TT-groupGalactose-binding domain-like(10.32.1)

FFamilyPPC(10.32.1.19)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Bacterial pre-peptidase C-terminal domain

ClanCL0202GBD

External Links

ECOD PDB View: 2O8O RCSB PDB: 2O8O PDBe: 2O8O UniProt: Q9S0X0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure