ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8snjB1 - ECOD Domain | ECOD

ECOD/Domains/e8snjB1

e8snjB1

UID: 003035798

PDB

Range: B:2-242
PDB: 8SNJ chain B(all domains)

Molecule: UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase

3D Structure

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Related Domains

Browse other domains in DegT_DnrJ_EryC1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilyDegT_DnrJ_EryC1(7577.1.1.6)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114

+ 1 additive (Tromethamine)

TromethamineTRS
DrugBank DB03754

Shown in the structure viewer.

Pfam Families

PF01041DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 8SNJ RCSB PDB: 8SNJ PDBe: 8SNJ

Downloads

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Drug annotations from DrugDomain.