ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7xjnB1 - ECOD Domain | ECOD

ECOD/Domains/e7xjnB1

e7xjnB1

UID: 003038188

PDB

Range: B:129-252
PDB: 7XJN chain B(all domains)

Molecule: Putrescine-binding periplasmic protein

3D Structure

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Related Domains

Browse other domains in SBP_bac_8 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_8(7523.1.1.28)

Ligands

in contact, ≤ 4 Å

N-(3-aminopropyl)propane-1,3-diamineNSD

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13416SBP_bac_8

Bacterial extracellular solute-binding protein

ClanCL0177PBP

External Links

ECOD PDB View: 7XJN RCSB PDB: 7XJN PDBe: 7XJN

Downloads

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