ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7xrmA1 - ECOD Domain | ECOD

ECOD/Domains/e7xrmA1

e7xrmA1

UID: 003038809

PDB

Range: A:1-453
PDB: 7XRM chain A(all domains)

Molecule: Ethanolamine ammonia-lyase large subunit

3D Structure

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Related Domains

Browse other domains in EutB →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyEutB(2002.1.1.144)

Ligands

in contact, ≤ 4 Å

CobalaminB12
(2~{R},3~{R},4~{S},5~{R})-2-(6-aminopurin-9-yl)-5-ethyl-oxolane-3,4-diolFWK

+ 2 additives (Glycerin, Ammonium ion)

GlycerinGOL

Pfam Families

Ethanolamine ammonia lyase large subunit (EutB)

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 7XRM RCSB PDB: 7XRM PDBe: 7XRM

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Ammonium ionNH4

Shown in the structure viewer. Drug annotations from DrugDomain.