ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7xroB1 - ECOD Domain | ECOD

ECOD/Domains/e7xroB1

e7xroB1

UID: 003038817

PDB

Range: B:85-164,B:269-291
PDB: 7XRO chain B(all domains)

Molecule: RipR

3D Structure

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Related Domains

Browse other domains in LysR_substrate →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyLysR_substrate(7523.1.1.15)

Ligands

in contact, ≤ 4 Å

GlycineGLY
drugDrugBank DB00145
3-phenylpropionic acidHCI
drugDrugBank DB02024
Chloride ion

Pfam Families

PF03466LysR_substrate

LysR substrate binding domain

ClanCL0177PBP

External Links

ECOD PDB View: 7XRO RCSB PDB: 7XRO PDBe: 7XRO

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.