ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7ycaH1 - ECOD Domain | ECOD

ECOD/Domains/e7ycaH1

e7ycaH1

UID: 003039195

PDB

Range: H:71-166
PDB: 7YCA chain H(all domains)

Molecule: Photosystem I PsaH, reaction centre subunit VI

3D Structure

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Related Domains

Browse other domains in PSI_PsaH →

Classification

AArchitectureextended segments(a.20)

XX-groupSubunit VI of Photosystem I reaction centre(6037)

HH-groupSubunit VI of Photosystem I reaction centre(6037.1)

TT-groupSubunit VI of Photosystem I reaction centre(6037.1.1)

FFamilyPSI_PsaH(6037.1.1.1)

Ligands

in contact, ≤ 4 Å

Beta caroteneBCR
drugDrugBank DB06755
Chlorophyll ACLA
drugDrugBank DB02133
1,2-Dipalmitoyl-Phosphatidyl-Glycerole

Pfam Families

PF03244PSI_PsaH

Photosystem I reaction centre subunit VI

External Links

ECOD PDB View: 7YCA RCSB PDB: 7YCA PDBe: 7YCA

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

drugDrugBank DB02043

(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOLNEX

1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROLSQD

Shown in the structure viewer. Drug annotations from DrugDomain.