ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7yffB1 - ECOD Domain | ECOD

ECOD/Domains/e7yffB1

e7yffB1

UID: 003039465

PDB

Range: B:567-607,B:627-683,B:842-869
PDB: 7YFF chain B(all domains)

Molecule: Glutamate receptor ionotropic, NMDA 2D

3D Structure

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Related Domains

Browse other domains in Lig_chan →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyLig_chan(5054.1.1.1)

Ligands

in contact, ≤ 4 Å

GlycineGLY
drugDrugBank DB00145within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00060Lig_chan

Ligand-gated ion channel

ClanCL0030Ion_channel

External Links

ECOD PDB View: 7YFF RCSB PDB: 7YFF PDBe: 7YFF

Downloads

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