ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e7yfgC4 - ECOD Domain | ECOD

ECOD/Domains/e7yfgC4

e7yfgC4

UID: 003039482

PDB

Range: C:395-544
PDB: 7YFG chain C(all domains)

Molecule: Glutamate receptor ionotropic, NMDA 1

3D Structure

Loading viewer...

Related Domains

Browse other domains in Lig_chan-Glu_bd →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyLig_chan-Glu_bd(7523.1.1.20)

Ligands

in contact, ≤ 4 Å

GlycineGLY
drugDrugBank DB00145
N-AcetylglucosamineNAG
drugDrugBank DB00141

Shown in the structure viewer. Drug annotations from .

Pfam Families

PF10613Lig_chan-Glu_bd

Ligated ion channel L-glutamate- and glycine-binding site

ClanCL0177PBP

External Links

ECOD PDB View: 7YFG RCSB PDB: 7YFG PDBe: 7YFG

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure