ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7yfiD1 - ECOD Domain | ECOD

ECOD/Domains/e7yfiD1

e7yfiD1

UID: 003039514

PDB

Range: D:391-525,D:759-817
PDB: 7YFI chain D(all domains)

Molecule: Glutamate receptor ionotropic, NMDA 2C

3D Structure

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Related Domains

Browse other domains in Lig_chan-Glu_bd →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyLig_chan-Glu_bd(7523.1.1.20)

Ligands

in contact, ≤ 4 Å

Glutamic acidGLU
drugDrugBank DB00142
N-AcetylglucosamineNAG
drugDrugBank DB00141

Shown in the structure viewer.

Pfam Families

PF10613Lig_chan-Glu_bd

Ligated ion channel L-glutamate- and glycine-binding site

ClanCL0177PBP

External Links

ECOD PDB View: 7YFI RCSB PDB: 7YFI PDBe: 7YFI

Downloads

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Drug annotations from DrugDomain.