ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7yu2B1 - ECOD Domain | ECOD

ECOD/Domains/e7yu2B1

e7yu2B1

UID: 003039959

PDB

Range: B:16-355
PDB: 7YU2 chain B(all domains)

Molecule: 6-aminohexanoate-oligomer endohydrolase

3D Structure

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Related Domains

Browse other domains in Peptidase_S58 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupMocoBD/DmpA-related(231)

HH-groupMocoBD/DmpA-related(231.1)

TT-groupDmpA/ArgJ(231.1.2)

FFamilyPeptidase_S58(231.1.2.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03576Peptidase_S58

Peptidase family S58

ClanCL0635DmpA_ArgJ

External Links

ECOD PDB View: 7YU2 RCSB PDB: 7YU2 PDBe: 7YU2

Downloads

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