ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7yv4A1 - ECOD Domain | ECOD

ECOD/Domains/e7yv4A1

e7yv4A1

UID: 003039964

PDB

Range: A:6-146,A:168-230
PDB: 7YV4 chain A(all domains)

Molecule: Ubiquitin carboxyl-terminal hydrolase isozyme L3

3D Structure

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Related Domains

Browse other domains in Peptidase_C12 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyPeptidase_C12(219.1.1.9)

Ligands

in contact, ≤ 4 Å

(2~{S})-2-(4-hydroxyphenyl)-6,8-dimethyl-5,7-bis(oxidanyl)-2,3-dihydrochromen-4-oneJXY

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01088Peptidase_C12

Ubiquitin carboxyl-terminal hydrolase, family 1

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 7YV4 RCSB PDB: 7YV4 PDBe: 7YV4

Downloads

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