ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8crjA2 - ECOD Domain | ECOD

ECOD/Domains/e8crjA2

e8crjA2

UID: 003056014

PDB

Range: A:-3-244
PDB: 8CRJ chain A(all domains)

Molecule: lipoate--protein ligase

3D Structure

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Related Domains

Browse other domains in LplA-B_cat →

Classification

AArchitecturea+b three layers(a.12)

XX-groupClass II aaRS and biotin synthetases(314)

HH-groupClass II aaRS and biotin synthetases(314.1)

TT-groupClass II aaRS and biotin synthetases(314.1.1)

FFamilyLplA-B_cat(314.1.1.12)

Ligands

in contact, ≤ 4 Å

5'-O-[(R)-({5-[(3R)-1,2-DITHIOLAN-3-YL]PENTANOYL}OXY)(HYDROXY)PHOSPHORYL]ADENOSINELAQ
Magnesium ionMG
metal

+ 3 additives (Glycerin, Sulfate ion, 1,2-ETHANEDIOL)

Glycerin

Pfam Families

PF21948LplA-B_cat

Lipoyl protein ligase A/B catalytic domain

ClanCL0040tRNA_synt_II

External Links

ECOD PDB View: 8CRJ RCSB PDB: 8CRJ PDBe: 8CRJ

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Sulfate ionSO4

DrugBank DB14546

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.