ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8dleA1 - ECOD Domain | ECOD

ECOD/Domains/e8dleA1

e8dleA1

UID: 003058217

PDB

Range: A:2-284
PDB: 8DLE chain A(all domains)

Molecule: 8-amino-7-oxononanoate synthase

3D Structure

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Related Domains

Browse other domains in Aminotran_1_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilyAminotran_1_2(7577.1.1.1)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114
N-{(2R)-2-hydroxy-3,3-dimethyl-4-[(trihydroxy-lambda~5~-phosphanyl)oxy]butanoyl}-beta-alanyl-N-(2-{4-[fluoro(dihydroxy)-lambda~4~-sulfanyl]phenyl}ethyl)-beta-alaninamideSWC

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Pfam Families

PF00155Aminotran_1_2

Aminotransferase class I and II

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 8DLE RCSB PDB: 8DLE PDBe: 8DLE

Downloads

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Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.