ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8c05A1 - ECOD Domain | ECOD

ECOD/Domains/e8c05A1

e8c05A1

UID: 003058550

PDB

Range: A:123-312
PDB: 8C05 chain A(all domains)

Molecule: Sensor domain-containing diguanylate cyclase

3D Structure

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Related Domains

Browse other domains in GGDEF →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyGGDEF(304.48.1.14)

Ligands

in contact, ≤ 4 Å

DiphosphateDPO
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Diguanylate cyclase, GGDEF domain

ClanCL0276Nucleot_cyclase

External Links

ECOD PDB View: 8C05 RCSB PDB: 8C05 PDBe: 8C05

Downloads

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